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342 entries « 1 of 7 »

2021

Kupferberg, Sarah J.

Rana Boylii (Foothill Yellow-legged Frog) Reproductive Behavior and Habitat Use Journal Article

In: Herpetological Review, vol. 52, no. 4, 2021.

BibTeX | Tags: natural history notes, Rana boylii

Golla, J. K.; Kuessner, M. L.; Henehan, M. J.; Bouchez, J.; Rempe, D. M.; Druhan, J. L.

The evolution of lithium isotope signatures in fluids draining actively weathering hillslopes Journal Article

In: Earth and Planetary Science Letters, vol. 567, no. 1, 2021.

Abstract | Links | BibTeX | Tags: Critical Zone, ERCZO, lithium isotopes, reactive transport, silicate weathering

Muller, M. F.; Roche, K. R.; Dralle, D. N.

Catchment processes can amplify the effect of increasing rainfall variability Journal Article

In: Environmental Research Letters, vol. 16, no. 8, 2021.

Abstract | Links | BibTeX | Tags: climate change, ERCZO, rainfall, Stream Flow, water resources

Vadeboncoeur, Yvonne; Moore, Marianne V; Stewart, Simon D; Chandra, Sudeep; Atkins, Karen S; Baron, Jill S; Bouma-Gregson, Keith; Brothers, Soren; Francoeur, Steven N; Genzoli, Laurel; Higgins, Scott N; Hilt, Sabine; Katona, Leon R; Kelly, David; Oleksy, Isabella A; Ozersky, Ted; Power, Mary E; Roberts, Derek; Smits, Adrianne P; Timoshkin, Oleg; Tromboni, Flavia; Zanden, M Jake Vander; Volkova, Ekaterina A; Waters, Sean; Wood, Susanna A; Yamamuro, Masumi

Blue Waters, Green Bottoms: Benthic Filamentous Algal Blooms Are an Emerging Threat to Clear Lakes Worldwide Journal Article

In: BioScience, vol. 71, no. 10, pp. 1011–1027, 2021.

Abstract | Links | BibTeX | Tags: attached filamentous algae, eutrophication, global change, littoral, periphyton

Dralle, D. N.; Hahm, W. J.; Chadwick, K. D.; McCormick, E.; Rempe, D. M.

Technical note: Accounting for snow in the estimation of root zone water storage capacity from precipitation and evapotranspiration fluxes Journal Article

In: Hydrology and Earth System Sciences, vol. 25, no. 5, pp. 2861–2867, 2021.

Abstract | Links | BibTeX | Tags: ERCZO, evapotranspiration, hydrologic modeling, root zone, snow melt, water storage

Hood, James M.; Collis, Lyndsie M.; Schade, John D.; Stark, Rebecca A.; Finlay, Jacques C.

Longitudinal patterns and linkages in benthic fine particulate organic matter composition, respiration, and nutrient uptake Journal Article

In: Limnology and Oceanography, 2021.

Abstract | Links | BibTeX | Tags: benthic, fine particulate organic matter, microbial biomass, Nutrient Cycling, Stream Ecology

Power, Mary E.

Synthetic threads through the web of life Journal Article

In: PNAS, 2021.

Abstract | Links | BibTeX | Tags: CRISPR, ecological impacts, gene drives, interaction strength, scale linkages

Bilir, T. Eren; Fung, Inez; Dawson, Todd E.

Slope-Aspect Induced Climate Differences Influence How Water Is Exchanged Between the Land and Atmosphere Journal Article

In: JGR Biogeosciences, vol. 126, no. 5, 2021.

Abstract | Links | BibTeX | Tags: MCMC, plant acclimation, sap velocity, topographic effect, transpiration drivers, transpiration modeling

Hungate, Bruce A.; Marks, Jane C.; Power, Mary E.; Schwartz, Egbert; van Groenigen, Kees Jan; Blazewicz, Steven J.; Chuckran, Peter; Dijkstra, Paul; Finley, Brianna K.; Firestone, Mary K.; Foley, Megan; Greenlon, Alex; Hayer, Michaela; Hofmockel, Kirsten S.; Koch, Benjamin J.; Mack, Michelle C.; Mau, Rebecca L.; Miller, Samantha N.; Morrissey, Ember M.; Propster, Jeffrey R.; Purcell, Alicia M.; Sieradzki, Ella; Starr, Evan P.; Stone, Bram W. G.; Terrer, César; Pett-Ridge, Jennifer

The Functional Significance of Bacterial Predators Journal Article

In: mBio, vol. 12, no. e00466-21, 2021.

Abstract | Links | BibTeX | Tags: 18O-H2O, Bdellovibrio, food webs, predator, qSIP, stable isotope probing, top-down control, trophic interactions

Pedrazas, Michelle A.; Hahm, W. Jesse; Huang, Mong-Han; Dralle, David; Nelson, Mariel D.; Breunig, Rachel E.; Fauria, Kristen E.; Bryk, Alexander B.; Dietrich, William E.; Rempe, Daniella M.

The Relationship Between Topography, Bedrock Weathering, and Water Storage Across a Sequence of Ridges and Valleys Journal Article

In: JGR Earth Surface, vol. 126, no. 4, 2021.

Abstract | Links | BibTeX | Tags: bedrock weathering, Critical Zone, hillslope, unsaturated zone, water storage, Weathering

Georgakakos, Philip B.

Impacts of Native and Introduced Species on Native Vertebrates in a Salmon-Bearing River Under Contrasting Thermal and Hydrologic Regimes PhD Thesis

2021.

Abstract | Links | BibTeX | Tags: aquatic ecosystems, ERCZO, O. mykiss, pacific lamprey, Rana boylii, river communities, Sacramento pikeminnow, steelhead trout

Bouma-Gregson, Keith; Power, Mary E.; Furey, Paula C.; Huckins, Casey J.; Vadeboncoeur, Yvonne

Taxon-specific photosynthetic responses of attached algal assemblages to experimental translocation between river habitats Journal Article

In: Freshwater Science, vol. 40, no. 1, 2021.

Abstract | Links | BibTeX | Tags: algae, benthic, Cladophora, cyanobacteria, electron transport rate, flow, Microcoleus, microhabitat, PAM, photosynthesis, temperature

Rossi, Gabriel J.; Power, Mary E.; Pneh, Shelley; Neuswanger, Jason R.; Caldwell, Timothy J.

Foraging modes and movements of Oncorhynchus mykiss as flow and invertebrate drift recede in a California stream Journal Article

In: Canadian Journal of Fisheries and Aquatic Sciences, 2021.

Abstract | Links | BibTeX | Tags: bioenergetics, ERCZO, foraging behavior, Mediterranean streams, Oncorhynchus mykiss, salmonids, stream hydraulics, video, videogrammetry

McCormick, E.; Dralle, D. N.; Hahm, W. J.; Tune, A. K.; Schmidt, L. M.; Chadwick, K. D.; Rempe, D. M.

Evidence for widespread woody plant use of water stored in bedrock Journal Article Forthcoming

In: Nature, Forthcoming.

Abstract | Links | BibTeX | Tags: bedrock water, ERCZO, root zone, transpiration, woody plants

2020

Schmidt, Logan; Rempe, Daniella M.

Quantifying Dynamic Water Storage in Unsaturated Bedrock with Borehole Nuclear Magnetic Resonance Journal Article

In: Geophysical Research Letters, vol. 47, no. 22, pp. e2020GL089600, 2020.

Abstract | Links | BibTeX | Tags: Critical Zone, ERCZO, hydrogeophysics, neutron moderation nuclear magnetic resonance, vadose zone, water storage

Wlostowski, Adam N.; Molotch, Noah; Anderson, Suzanne P.; Brantley, Susan L.; Chorover, Jon; Dralle, David; Kumar, Praveen; Li, Li; Lohse, Kathleen A.; Mallard, John M.; McIntosh, Jennifer C.; Murphy, Sheila F.; Parrish, Eric; Safeeq, Mohammad; Seyfried, Mark; Shi, Yuning; Harman, Ciaran

Signatures of Hydrologic Function Across the Critical Zone Observatory Network Journal Article

In: Water Resources Research, vol. 57, no. 3, 2020.

Abstract | Links | BibTeX | Tags: catchment sensitivity, critical zone structure, ERCZO, meta-analysis, water balance

Ishikawa, Naoto F.; Finlay, Jacques C.; Uno, Hiromi; Ogawa, Nanako O.; Ohkouchi, Naohiko; Tayasu, Ichiro; Power, Mary E.

Combined use of radiocarbon and stable carbon isotopes for the source mixing model in a stream food web Journal Article

In: Limnology and Oceanography, vol. 65, no. 11, pp. 2688-2696, 2020.

Abstract | Links | BibTeX | Tags: food web, freshwater ecosystem, stable isotopes, stream invertebrates

Sharrar, A. M.; Crits-Christoph, A.; Méheust, R.; Diamond, S.; Starr, E. P.; Banfield, J. F.

Bacterial secondary metabolite biosynthetic potential in soil varies with phylum, depth, and vegetation type. Journal Article

In: mBio, vol. 11, pp. e00416-20, 2020.

Abstract | Links | BibTeX | Tags: ERCZO, metagenomics, secondary metabolism, soil microbiology

Rossi, Gabriel J

Food, Phenology, and Flow—How Prey Phenology and Streamflow Dynamics Affect the Behavior, Ecology, and Recovery of Pacific Salmon PhD Thesis

2020.

BibTeX | Tags: behavior, ERCZO, food webs, mediterranean stream, Oncorhynchus mykiss, phenology

Uno, Hiromi; Pneh, Shelley

Effect of source habitat spatial heterogeneity and species diversity on the temporal stability of aquatic‐to‐terrestrial subsidy by emerging aquatic insects Journal Article

In: Ecological Research, vol. 35, no. 3, pp. 474-481, 2020.

Abstract | Links | BibTeX | Tags: diversity, ecological function, ERCZO, predator-prey dynamics, Riparian, STREAM

Wang, Terrance; Kelson, Suzanne J.; Greer, George; Thompson, Sally E.; Carlson., Stephanie M.

Tributary confluences are dynamic thermal refuges for a juvenile salmonid in a warming river network Journal Article

In: River Research and Applications, 2020.

Abstract | Links | BibTeX | Tags: climate change, Eel river, ERCZO, microhabitat, Oncorhynchus mykiss, stream temperatures, thermal refuges, thermal tolerance

Kelson, Suzanne J.; Power, Mary E.; Finlay, Jacques C.; Carlson, Stephanie M.

Partial migration alters population ecology and food chain length: evidence from a salmonid fish Journal Article

In: Ecosphere, vol. 11, no. 2, pp. e03044, 2020.

Abstract | Links | BibTeX | Tags: eco-evolutionary dynamics, ERCZO, extended phenotype, food chain length, intraspecific variation, life history, O. mykiss, Oncorhynchus mykiss, partial migration, population ecology, size structure, steelhead/rainbow trout

Al-Shayeb, Basem; Sachdeva, Rohan; Chen, Lin-Xing; Ward, Fred; Munk, Patrick; Devoto, Audra; Castelle, Cindy J.; Olm, Matthew R.; Bouma-Gregson, Keith; Amano, Yuki; He, Christine; Méheust, Raphaël; Brooks, Brandon; Thomas, Alex; Lavy, Adi; Matheus-Carnevali, Paula; Sun, Christine; Goltsman, Daniela S. A.; Borton, Mikayla A.; Sharrar, Allison; Jaffe, Alexander L.; Nelson, Tara C.; Kantor, Rose; Keren, Ray; Lane, Katherine R.; Farag, Ibrahim F.; Lei, Shufei; Finstad, Kari; Amundson, Ronald; Anantharaman, Karthik; Zhou, Jinglie; Probst, Alexander J.; Power, Mary E.; Tringe, Susannah G.; Li, Wen-Jun; Wrighton, Kelly; Harrison, Sue; Morowitz, Michael; Relman, David A.; Doudna, Jennifer A.; Lehours, Anne-Catherine; Warren, Lesley; Cate, Jamie H. D.; Santini, Joanne M.; Banfield, Jillian F.

Clades of huge phages from across Earth’s ecosystems Journal Article

In: Nature, vol. 578, pp. 425-431, 2020.

Abstract | Links | BibTeX | Tags: bacteriophage, ERCZO, metagenomes, metagenomic sequencing

Kelson, Suzanne J.; Miller, Michael R.; Thompson, Tasha Q.; O'Rourke, Sean M.; Carlson, Stephanie M.

Temporal dynamics of migration‐linked genetic variation are driven by streamflows and riverscape permeability Journal Article

In: Molecular Ecology, vol. 29, no. 5, pp. 870-885, 2020.

Abstract | Links | BibTeX | Tags: ecology, ERCZO, genetic variation, landscape genetics, life history, O. mykiss, Oncorhynchus mykiss, partial barrier, partial migration, river networks

Uno, Hiromi; Stillman, Jonathon H.

Lifetime eurythermy by seasonally matched thermal performance of developmental stages in an annual aquatic insect Journal Article

In: Oecologia, vol. 192, no. 3, pp. 647-656, 2020.

Abstract | Links | BibTeX | Tags: Aquatic insect, life cycle, season, STREAM, temperature

Dawson, T. E.; Hahm, W. J.; Crutchfield-Peters, K.

Digging deeper: what the critical zone perspective adds to the study of plant ecophysiology Journal Article

In: New Phytologist, vol. 226, no. 3, pp. 666-671, 2020.

Abstract | Links | BibTeX | Tags: Critical Zone, ERCZO, nutrients, plant ecophysiology, soil, water, weathered bedrock

2019

Diamond, Spencer; Andeer, Peter F.; Li, Zhou; Crits-Christoph, Alexander; Burstein, David; Anantharaman, Karthik; Lane, Katherine R.; Thomas, Brian C.; Pan, Chongle; Northen, Trent R.; Banfield, Jillian F.

Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms. Journal Article

In: Nature Microbiology, vol. 4, pp. 1356-1367, 2019.

Abstract | Links | BibTeX | Tags: ERCZO, metagenomics, soil microbes

Kelson, Suzanne J.; Carlson, Stephanie M.

Do precipitation extremes drive growth and migration timing of a Pacific salmonid fish in Mediterranean‐climate streams? Journal Article

In: Ecosphere, vol. 10, no. 3, pp. e02618, 2019.

Abstract | Links | BibTeX | Tags: Drought, ERCZO, growth, headwaters, migration, Oncorhynchus mykiss, salmonids, stream flows

Bouma-Gregson, Keith; Olm, Matthew R.; Probst, Alexander J.; Anantharaman, Karthik; Power, Mary E.; Banfield, Jillian F.

Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network Journal Article

In: The ISME Journal, vol. 13, pp. 1618–1634, 2019.

Abstract | Links | BibTeX | Tags: algae, cyanobacteria, ERCZO

Kelson, Suzanne J.; Miller, Michael R.; Thompson, Tasha Q.; O'Rourke, Sean M.; Carlson, Stephanie M.

Do genomics and sex predict migration in a partially migratory salmonid fish, Oncorhynchus mykiss? Journal Article

In: Canadian Journal of Fisheries and Aquatic Sciences, vol. 76, no. 11, pp. 2080-2088, 2019.

Abstract | Links | BibTeX | Tags: ERCZO, genetic variation, O. mykiss, partial migration

Gaynor, Kaitlyn M.; Brown, Joel S.; Middleton, Arthur D.; Power, Mary E.; Brashares, Justin S.

Landscapes of Fear: Spatial Patterns of Risk Perception and Response. Journal Article

In: Trends in Ecology & Evolution , vol. 34, no. 4, pp. 355-368, 2019.

Abstract | Links | BibTeX | Tags: anti-predator defenses, predator–prey interaction, risk effects

2018

Crits-Christoph, Alexander; Diamond, Spencer; Butterfield, Cristina N.; Thomas, Brian C.; Banfield, Jillian F.

Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis Journal Article

In: Nature, vol. 558, pp. 440-444, 2018.

Abstract | Links | BibTeX | Tags: metagenomic sequencing, soil microbes

Bouma-Gregson, Keith; Kudela, Raphael M.; Power, Mary

Widespread anatoxin-a detection in benthic cyanobacterial mats throughout a river network Journal Article

In: PLoS One, vol. 13, no. 5, 2018.

Abstract | Links | BibTeX | Tags: algae, biodiversity, ERCZO

Rempe, Daniella; Dietrich, William

Direct observations of rock moisture, a hidden component of the hydrologic cycle Journal Article

In: Proceedings of the National Academy of Science of the United States of America, vol. 115, no. 11, pp. 2664-2669, 2018.

Abstract | Links | BibTeX | Tags: Critical Zone, deep vadose zone, ERCZO, evapotranspiration, rock moisture, water budget

Power, Mary; Estes, James; Kareiva, Peter; Levin, Simon; Lubchenco, Jane; Palumbi, Stephen

Biographical Memoire: Robert Paine Miscellaneous

2018.

Abstract | Links | BibTeX | Tags: keystone species, memoire, patch dynamics, trophic cascades

2017

Bouma-Gregson, Keith

The Ecology of Benthic Toxigenic Anabaena and Phormidium (Cyanobacteria) in the Eel River, California PhD Thesis

University of California, Berkeley, 2017, ISBN: 978-0-355-94920-9.

Abstract | BibTeX | Tags: Anabaena, Anatoxin-a, Biological sciences, cyanobacteria, Cyanotoxin, ERCZO, metagenomics, Phormidium

Vadeboncoeur, Yvonne; Power, Mary

Attached Algae: The Cryptic Base of Inverted Trophic Pyramids in Freshwaters Journal Article

In: Annual Review of Ecology, Evolution, and Systematics, vol. 48, no. 1, pp. 255-279, 2017.

Abstract | Links | BibTeX | Tags: Cladophora, cyanobacteria, diatoms, grazers, lakes, microphytobenthos, periphyton, primary consumer, primary producer, rivers

Sculley, John; Lowe, Rex L.; Nittrouer, Charles; Drexler, Tina; Power, Mary

Eighty years of food-web response to interannual variation in discharge recorded in river diatom frustules from an ocean sediment core Journal Article

In: Proceedings of the National Academy of Science of the United States of America, vol. 114, no. 38, pp. 10155–10159, 2017.

Abstract | Links | BibTeX | Tags: diatom frustule, ecological upscaling, food-web controls, paleoproxy, river discharge, variation

Bouma-Gregson, Keith; Power, Mary; Bormans, Myriam

Rise and fall of toxic benthic freshwater cyanobacteria (Anabaena spp.) in the Eel river: Buoyancy and dispersal Journal Article

In: Harmful Algae, vol. 66, no. 1, pp. 79-87, 2017.

Abstract | Links | BibTeX | Tags: Benthic cyanobacteria Anabaena Buoyancy Harmful algal bloom Anatoxin-a Dispersal, ERCZO

Grant, Gordon E.; Dietrich, William E.

The frontier beneath our feet Journal Article

In: Water Resources Research, vol. 53, no. 4, pp. 2605-2609, 2017.

Abstract | Links | BibTeX | Tags: Critical Zone, environmental problems, ERCZO, field studies, groundwater, landscape development, water

Schaaf, Cody J.; Kelson, Suzanne J.; Nusslé, Sébastien C.; Carlson, Stephanie M.

Black spot infection in juvenile steelhead trout increases with stream temperature in northern California Journal Article

In: Environmental Biology of Fishes, vol. 100, no. 6, pp. 733-744, 2017.

Abstract | Links | BibTeX | Tags: black spot disease, ecology, ERCZO, parasitism, steelhead trout, water temperature

Alessandro Catenazzi, Sarah J. Kupferberg

Variation in thermal niche of a declining river-breeding frog:From counter-gradient responses to population distributionpatterns Journal Article

In: Freshwater Biology, vol. 62, no. 7, pp. 1255-1265, 2017.

Abstract | Links | BibTeX | Tags: climate sensitivity, common-garden experiment, declining amphibians, hypolimnetic releases, Rana boylii

Kim, Hyojin; Dietrich, William E.; Thurnhoffer, Benjamin M.; Bishop, Jim K. B.; Fung, Inez Y.

Controls on solute concentration‐discharge relationships revealed by simultaneous hydrochemistry observations of hillslope runoff and stream flow: The importance of critical zone structure Journal Article

In: Water Resources Research, vol. 53, no. 2, pp. 1424-1443, 2017.

Abstract | Links | BibTeX | Tags: concentration-discharge relationships, critical zone structure, ERCZO, simultaneous observations of ground water and stream water

Brett, Michael T.; Bunn, Stuart E.; Chandra, Sudeep; Galloway, Aaron W. E.; Guo, Fen; Kainz, Martin J.; Kankaala, Paula; Lau, Danny C. P.; Moulton, Timothy P.; Power, Mary E.; Rasmussen, Joseph B.; Taipale, Sami J.; Thorp, James H.; Wehr, John D.

How important are terrestrial organic carbon inputs for secondary production in freshwater ecosystems? Journal Article

In: Freshwater Biology, vol. 62, no. 5, pp. 833-853, 2017.

Abstract | Links | BibTeX | Tags: allochthonous, autochthonous, biochemical composition, freshwater, resource utilisation

2016

Butterfield, Cristina N.; Li, Zhou; Andeer, Peter F.; Spaulding, Susan; Thomas, Brian C.; Singh, Andrea; Hettich, Robert L.; Suttle, Kenwyn B.; Probst, Alexander J.; Tringe, Susannah G.; Northen, Trent; Pan, Chongle; Banfield, Jillian F.

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone. Journal Article

In: PeerJ, vol. 4, pp. e2687, 2016.

Abstract | Links | BibTeX | Tags: metagenomics, northern California, soil microbes

Riebe, Clifford S.; Hahm, W. Jesse; Brantley, Susan L.

Controls on deep critical zone architecture: a historical review and four testable hypotheses Journal Article

In: Earth Surface Processes and Landforms, vol. 42, no. 1, pp. 128-156, 2016.

Abstract | Links | BibTeX | Tags: regolith production; near-surface geophysics; weathering; fractures

Estes, James; Dayton, Paul; Kareiva, Peter; Levin, Simon; Lubchenco, Jane; Menge, Bruce; Palumbi, Stephen; Mary,; Power,; Terborgh, John

A keystone ecologist: Robert Treat Paine, 1933–2016 Journal Article

In: Ecology, vol. 97, no. 11, pp. 2905-2909, 2016.

Abstract | Links | BibTeX | Tags: intermediate disturbance, keystone species, mentor, patch dynamics, tribute to life, trophic cascade, zonation

Lee, Jun-Hak; Biging, Gregory; Fisher, Joshua

An Individual Tree-Based Automated Registration of Aerial Images to Lidar Data in a Forested Area Journal Article

In: Photogrammetric Engineering & Remote Sensing, vol. 82, no. 9, pp. 699-701, 2016.

Abstract | Links | BibTeX | Tags: aerial images, LiDAR, tree tops

Lind, Amy; Welsh, Hartwell; Wheeler, Clara

Foothill yellow-legged frog (Rana boylii) oviposition site choice at multiple spatial scales Journal Article

In: Journal of Herpetology, vol. 50, no. 2, pp. 263-270, 2016.

Abstract | Links | BibTeX | Tags: Rana boylii

Uno, Hiromi

Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata PhD Thesis

University of California, Berkeley, 2016, ISBN: 978-1-369-05549-8.

Abstract | BibTeX | Tags: Aquatic insect, Aquatic-terrestrial linkage, Biological sciences, ERCZO, food web, Spatial heterogeneity, subsidy, Temporal heterogeneity

342 entries « 1 of 7 »